RID: 0W7SRFA6016	
Job Title:CAPSD_BPPAJ (############## ## 349 ####				
Program: BLASTP 
Query: CAPSD_BPPAJ (############## ## 349 #### 667 ########################), Capsid protein {ECO:0000269|PubMed:19010363} ID: lcl|Query_5231522(amino acid) Length: 319
Database: swissprot Non-redundant UniProtKB/SwissProt sequences
	
Sequences producing significant alignments:
                                                                  Scientific      Common                     Max    Total Query   E   Per.   Acc.                        
Description                                                       Name            Name            Taxid      Score  Score cover Value Ident  Len        Accession        
RecName: Full=Capsid polyprotein; AltName: Full=ORF3 protein;...  Pseudomonas ... NA              504346     641    641   100%  0.0   100.00 667        P85500.2         
RecName: Full=Probable major capsid protein gp17; AltName:...     Fromanvirus D29 NA              28369      60.1   60.1  90%   2e-10 24.68  318        O64210.1         
RecName: Full=Probable major capsid protein gp17; AltName:...     Fromanvirus L5  NA              31757      57.4   57.4  90%   2e-09 25.00  326        Q05223.2         

Alignments:

>RecName: Full=Capsid polyprotein; AltName: Full=ORF3 protein; Contains: RecName: Full=Capsid protein [Pseudomonas phage PAJU2]
Sequence ID: P85500.2 Length: 667
Range 1: 349 to 667

Score:641 bits(1654), Expect:0.0, 
Method:Compositional matrix adjust., 
Identities:319/319(100%), Positives:319/319(100%), Gaps:0/319(0%)

Query  1    AAVAAATTSDATWAGPLVGDETSVFADFVEYLRPQTILGRFGTNGIPSLRRVPFRVPLIG  60
            AAVAAATTSDATWAGPLVGDETSVFADFVEYLRPQTILGRFGTNGIPSLRRVPFRVPLIG
Sbjct  349  AAVAAATTSDATWAGPLVGDETSVFADFVEYLRPQTILGRFGTNGIPSLRRVPFRVPLIG  408

Query  61   QTSGGDGYWVGEGQAKPLTKFDFERKTLEPLKVANIAVATMEVIRDSSPSADVIIRDQLA  120
            QTSGGDGYWVGEGQAKPLTKFDFERKTLEPLKVANIAVATMEVIRDSSPSADVIIRDQLA
Sbjct  409  QTSGGDGYWVGEGQAKPLTKFDFERKTLEPLKVANIAVATMEVIRDSSPSADVIIRDQLA  468

Query  121  AALRERLDIDFIDPAKAAVAGVSPASILNGVAGIPSSGNTADDVRADIRALFNAFIAANN  180
            AALRERLDIDFIDPAKAAVAGVSPASILNGVAGIPSSGNTADDVRADIRALFNAFIAANN
Sbjct  469  AALRERLDIDFIDPAKAAVAGVSPASILNGVAGIPSSGNTADDVRADIRALFNAFIAANN  528

Query  181  APTSGVWLMPATTALALSLMQNPLGQAEFPGISMTGGTLFGLPVIVSEYIPTASAGAVVA  240
            APTSGVWLMPATTALALSLMQNPLGQAEFPGISMTGGTLFGLPVIVSEYIPTASAGAVVA
Sbjct  529  APTSGVWLMPATTALALSLMQNPLGQAEFPGISMTGGTLFGLPVIVSEYIPTASAGAVVA  588

Query  241  LVNASDIYLGDEGGVDLSMSTEASLQMDNAPDNPTTASTVLVSLWQRNLVGFRAERAINW  300
            LVNASDIYLGDEGGVDLSMSTEASLQMDNAPDNPTTASTVLVSLWQRNLVGFRAERAINW
Sbjct  589  LVNASDIYLGDEGGVDLSMSTEASLQMDNAPDNPTTASTVLVSLWQRNLVGFRAERAINW  648

Query  301  ARRRASAVAYLTGVNWGAA  319
            ARRRASAVAYLTGVNWGAA
Sbjct  649  ARRRASAVAYLTGVNWGAA  667




>RecName: Full=Probable major capsid protein gp17; AltName: Full=Gene product 17; Short=gp17; AltName: Full=Major head protein gp17 [Fromanvirus D29]
Sequence ID: O64210.1 Length: 318
Range 1: 22 to 311

Score:60.1 bits(144), Expect:2e-10, 
Method:Compositional matrix adjust., 
Identities:77/312(25%), Positives:123/312(39%), Gaps:47/312(15%)

Query  28   FVEYLRPQTILGRFGTNGIPSL-----RRVPF-----RVPL-IGQTSGGDGYWVGEGQAK  76
            F  YL P+     F      S+     ++VP      ++P  +G  S     W+GEG  K
Sbjct  22   FKGYLEPEQAKDYFAEAEKTSIVQQFAQKVPMGTTGQKIPHWVGDVSA---QWIGEGDMK  78

Query  77   PLTKFDFERKTLEPLKVANIAVATMEVIRDSSPSADVIIRDQLAAALRERLDIDFIDPAK  136
            P+TK +   +T+ P K+A I VA+ E +R +  +    +R ++A A     D        
Sbjct  79   PITKGNMTSQTIAPHKIATIFVASAETVRANPANYLGTMRTKVATAFAMAFD-------G  131

Query  137  AAVAGVS---PASILNGVAGIPSSGNTADDVRADIRALFNAFIAANNAPTSGVWLMPATT  193
            AA+ G     P  I      I  +  T      D  A+    +  N+       L+   T
Sbjct  132  AAMHGTDSPFPTYIGQTTKAISIADTTGATTVYDQVAVNGLSLLVNDGKKWTHTLLDDIT  191

Query  194  ALALS----------LMQNPLGQAEFPGISMTGGTLFGLPVIVSEYIPTASAGAVVALV-  242
               L+           +++  G+A  P      G +   P I+S+++     G  V  + 
Sbjct  192  EPILNGAKDQNGRPLFIESTYGEAASP---FRSGRIVARPTILSDHV---VEGTTVGFMG  245

Query  243  NASDIYLGDEGGVDLSMSTEASLQMDNAPDNPTTASTVLVSLWQRNLVGFRAERAINWAR  302
            + S +  G  GG+   ++ +A+L +       T  S   VSLWQ NLV  R E    +  
Sbjct  246  DFSQLIWGQIGGLSFDVTDQATLNLG------TVESPNFVSLWQHNLVAVRVEAEYAFHC  299

Query  303  RRASAVAYLTGV  314
              A A   LT V
Sbjct  300  NDAEAFVALTNV  311




>RecName: Full=Probable major capsid protein gp17; AltName: Full=Gene product 17; Short=gp17; AltName: Full=Major head protein gp17 [Fromanvirus L5]
Sequence ID: Q05223.2 Length: 326
Range 1: 27 to 322

Score:57.4 bits(137), Expect:2e-09, 
Method:Compositional matrix adjust., 
Identities:78/312(25%), Positives:128/312(41%), Gaps:40/312(12%)

Query  28   FVEYLRPQTILGRFGT-NGIPSLRRVPFRVPL--IGQ-----TSGGDGYWVGEGQAKPLT  79
            F  YL P+     F     I  +++   ++P+   GQ     T      W+GEG  KP+T
Sbjct  27   FEGYLEPEQAQDYFAEAEKISIVQQFAQKIPMGTTGQKIPHWTGDVSASWIGEGDMKPIT  86

Query  80   KFDFERKTLEPLKVANIAVATMEVIRDSSPSADVIIRDQLAAALRERLDIDFIDPAKAAV  139
            K +   +T+ P K+A I VA+ E +R +  +    +R ++A A     D        AA+
Sbjct  87   KGNMTSQTIAPHKIATIFVASAETVRANPANYLGTMRTKVATAFAMAFD-------NAAI  139

Query  140  AGV-SP-----ASILNGVAGI--PSSGNTADDVRADIRALFNAFIAANNAPTSGVWLMPA  191
             G  SP     A     V+ +    +G+ AD    D  A+    +  N        L+  
Sbjct  140  NGTDSPFPTFLAQTTKEVSLVDPDGTGSNADLTVYDAVAVNALSLLVNAGKKWTHTLLDD  199

Query  192  TTALALSLMQNPLGQAEFPGISMTG-------GTLFGLPVIVSEYIPTASAGAVVALV-N  243
             T   L+  ++  G+  F   + T        G +   P I+S+++   ++G VV    +
Sbjct  200  ITEPILNGAKDKSGRPLFIESTYTEENSPFRLGRIVARPTILSDHV---ASGTVVGYQGD  256

Query  244  ASDIYLGDEGGVDLSMSTEASLQMDNAPDNPTTASTVLVSLWQRNLVGFRAERAINWARR  303
               +  G  GG+   ++ +A+L +   P  P       VSLWQ NLV  R E    +   
Sbjct  257  FRQLVWGQVGGLSFDVTDQATLNL-GTPQAPN-----FVSLWQHNLVAVRVEAEYAFHCN  310

Query  304  RASAVAYLTGVN  315
               A   LT V+
Sbjct  311  DKDAFVKLTNVD  322